Locus Nr of genes in locus Chromosome and position Ensembl Gene ID Gene symbol Nominal P value Gene closest to lead SNP Gene bio-type Top cis eQTL SNP (Westra et al. Nature Genetics 2014) False discovery rate < 5% rs11125883 5 chr2:61293006-61765761 ENSG00000173209 AHSA2 0.004098954934287184 false protein_coding+processed_transcript+retained_intron - No rs11125883 5 chr2:61293006-61765761 ENSG00000115464 USP34 0.005988740373926782 false protein_coding+processed_transcript+retained_intron+nonsense_mediated_decay - No rs11125883 5 chr2:61293006-61765761 ENSG00000082898 XPO1 0.007925357932025145 true protein_coding+nonsense_mediated_decay+retained_intron+processed_transcript - No rs9926112 1 chr16:134273-188859 ENSG00000103148 NPRL3 0.04441274751065282 true retained_intron+processed_transcript+nonsense_mediated_decay+protein_coding rs7199157;rs1061438 No rs223116 1 chr14:23938897-23979071 ENSG00000129460 NGDN 0.07184318325217637 true protein_coding+retained_intron rs2295705;rs2145565 No rs7350447 1 chr10:23983675-24836772 ENSG00000120549 KIAA1217 0.07709257126022212 true protein_coding+processed_transcript+retained_intron - No rs1034392 1 chr16:14014014-14046205 ENSG00000175595 ERCC4 0.09799084755399134 true protein_coding+processed_transcript - No rs13398896 1 chr2:67624451-67637677 ENSG00000143971 ETAA1 0.1253182672910063 true protein_coding+processed_transcript - No rs7161677 1 chr14:94371076-94393412 ENSG00000258584 C14orf86 0.15037687328903404 true processed_transcript - No rs6837748 1 chr4:17173380-17187682 ENSG00000250819 - 0.16663251039078664 true lincRNA - No rs2027129 1 chr10:37414785-37521495 ENSG00000148513 ANKRD30A 0.20976359954935053 true protein_coding+processed_transcript - No rs10884947 1 chr10:112052798-112064709 ENSG00000119953 SMNDC1 0.21984429963266822 true protein_coding+processed_transcript rs14401 No rs6752189 1 chr2:164449906-164592522 ENSG00000182263 FIGN 0.3129991038135972 true protein_coding+processed_transcript rs17203208 No rs10950321 1 chr7:10971578-10979883 ENSG00000189043 NDUFA4 0.31992198812125966 true protein_coding+retained_intron+processed_transcript - No rs4396297 1 chr11:69061605-69182494 ENSG00000172927 MYEOV 0.38668121088018964 true protein_coding+processed_transcript+retained_intron rs10047435 No rs3785076 1 chr16:68771128-68869444 ENSG00000039068 CDH1 0.4934659861626623 true protein_coding rs13335476 No rs17389324 1 chr2:121493199-121750229 ENSG00000074047 GLI2 0.5112531153703055 true processed_transcript+retained_intron+protein_coding+nonsense_mediated_decay - No rs11125883 5 chr2:61293006-61765761 ENSG00000162929 KIAA1841 0.5331743968247972 false processed_transcript+nonsense_mediated_decay+protein_coding+retained_intron - No rs11125883 5 chr2:61293006-61765761 ENSG00000212978 - 0.5845487746944114 false processed_transcript+retained_intron - No rs11081080 1 chr18:3496030-4151290 ENSG00000170579 DLGAP1 0.6039803625226935 true protein_coding+processed_transcript rs4798147 No rs13400448 1 chr2:56411258-56613308 ENSG00000055813 CCDC85A 0.6141175079907735 true protein_coding - No rs9609813 1 chr22:33561991-34318829 ENSG00000133424 LARGE 0.6450136020043646 true protein_coding+processed_transcript rs5994705;rs7284217 No rs1465555 2 chr5:151202074-151650009 ENSG00000254226 - 0.8039297850689464 false lincRNA - No rs2375856 1 chr2:197063977-197458416 ENSG00000138411 HECW2 0.862432676255707 true protein_coding+retained_intron rs2290511 No rs4932525 1 chr15:91951938-92148441 ENSG00000258551 - 0.868471493009757 true lincRNA - No rs4427395 1 chr1:237205505-238129359 ENSG00000198626 RYR2 0.911370317990966 true protein_coding+processed_transcript - No rs9317883 1 chr13:70274726-70682591 ENSG00000150361 KLHL1 0.9339488270883447 true protein_coding rs7989613;rs9572196 No rs1465555 2 chr5:151202074-151650009 ENSG00000145888 GLRA1 0.9519018895545986 true protein_coding+nonsense_mediated_decay+processed_transcript - No rs10181805 1 chr2:148602086-148688393 ENSG00000121989 ACVR2A 0.9559855275844961 true processed_transcript+protein_coding+retained_intron rs13016512 No rs2930848 1 chr15:74509613-74628813 ENSG00000140481 CCDC33 0.988901422553368 true protein_coding+nonsense_mediated_decay - No rs10503583 1 chr8:15965387-16424999 ENSG00000038945 MSR1 0.990330433645408 true protein_coding+nonsense_mediated_decay+processed_transcript - No